Information for 12-AATCTGCAAGTG (Motif 10)


Reverse Opposite:

p-value:1e-12
log p-value:-2.781e+01
Information Content per bp:1.964
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets141.0 +/- 86.0bp
Average Position of motif in Background142.5 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATCTGCAAGTG----
NNNNTGCCAGTGATTG

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AATCTGCAAGTG
-ATATGCAAAT-

MA0464.1_Bhlhe40/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AATCTGCAAGTG--
---NTGCACGTGAG

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATCTGCAAGTG-----
NANTTTCAAGTGGTTAN

MA0473.1_ELF1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATCTGCAAGTG
GAACCAGGAAGTG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATCTGCAAGTG------
-ATCCACAGGTGCGAAAA

MA0507.1_POU2F2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATCTGCAAGTG--
-ATATGCAAATNNN

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATCTGCAAGTG
GAAAGTGAAAGT-

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATCTGCAAGTG
-TTATGCAAAT-

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AATCTGCAAGTG---
-----KCACGTGMCN