Information for 14-GATATTTGGACC (Motif 12)


Reverse Opposite:

p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.7 +/- 86.9bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATATTTGGACC
CCATATATGG---

PH0077.1_Hoxd12/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATATTTGGACC---
NNNATTTTACGACNNTN

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATATTTGGACC
CTAATATTGCTAAA

MA0042.1_FOXI1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATATTTGGACC
GGATGTTTGTTT-

MA0017.1_NR2F1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATATTTGGACC-
TGACCTTTGAACCT

MA0083.2_SRF/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GATATTTGGACC--
TTNCCTTATTTGGNCATN

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GATATTTGGACC---
ANNATTTTACGACNTNA

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GATATTTGGACC--
NNCTTTGTTTTGNTNNN

MA0484.1_HNF4G/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATATTTGGACC--
TGGACTTTGNNCTCN

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATATTTGGACC
CCATATATGGNA-