Information for 11-TTTGCAAACG (Motif 14)


Reverse Opposite:

p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.708
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif8.13%
Number of Background Sequences with motif1862.1
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets128.7 +/- 78.2bp
Average Position of motif in Background143.9 +/- 92.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTGCAAACG
TTTGAAACCG

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAACG
ANATTTTTGCAANTN

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCAAACG----
NNTTTGCACACGGCCC

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCAAACG
ATTTGCATAT-

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAAACG
ATTTGCATAA-

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAACG-
TNTAATTTGCATACNA

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAAACG-
TNTAATTTGCATANNN

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTGCAAACG
-TTGCCAAG-

MA0507.1_POU2F2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTGCAAACG
TTCATTTGCATAT-

MA0102.3_CEBPA/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCAAACG
NATTGTGCAAT--