Information for 4-AATGATCG (Motif 16)


Reverse Opposite:

p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.599
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif20.04%
Number of Background Sequences with motif6266.9
Percentage of Background Sequences with motif13.45%
Average Position of motif in Targets142.1 +/- 79.3bp
Average Position of motif in Background144.1 +/- 95.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATGATCG
CATGAC--

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATGATCG---
TAATGATGATCACTA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATGATCG
GKTAATGR---

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATGATCG--
ACTATGAATGAATGAT

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGATCG--------
AAAACATCGTTTTTAAG

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATGATCG
NTATYGATCH

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGATCG---
TCCACTAATTAGCGGTT

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------AATGATCG--
AAGGCGAAATCATCGCA

PH0023.1_Dlx4/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATGATCG---
GTCGGTAATTATNGNGN

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATGATCG---
NNNGGTAATTATNGNGN