Information for 7-TCCGTTTA (Motif 17)


Reverse Opposite:

p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.641
Number of Target Sequences with motif406.0
Percentage of Target Sequences with motif29.48%
Number of Background Sequences with motif10191.3
Percentage of Background Sequences with motif21.88%
Average Position of motif in Targets141.4 +/- 76.0bp
Average Position of motif in Background144.9 +/- 94.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0593.1_FOXP2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCCGTTTA---
TNTGTTTACTT

MA0481.1_FOXP1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCCGTTTA------
CTTTGTTTACTTTTN

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTTA---
NYYTGTTTACHN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCCGTTTA-
-CTGTTTAC

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTTTA----
NNNNTTTGTTTACNNT

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTTTA
BRRCVGTTDN

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTTA--
TCCTGTTTACA

MA0157.1_FOXO3/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCCGTTTA--
--TGTTTACA

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCCGTTTA---
--TGTTTATTT

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTTTA------
NNNTTTGTTTACNTTNN