Information for 16-CTCATACCCGAA (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.899
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.3 +/- 72.2bp
Average Position of motif in Background177.4 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCATACCCGAA
NNACTTACCTN--

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCATACCCGAA-----
-TCGTACCCGCATCATT

MA0111.1_Spz1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCATACCCGAA
GCTGTTACCCT--

PB0020.1_Gabpa_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCATACCCGAA------
-CAATACCGGAAGTGTAA

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCATACCCGAA-
ANANNTGATACCCNATN

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCATACCCGAA-
ANANNTGATACCCTATN

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCATACCCGAA-
AATNTTGATACCCTATN

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCATACCCGAA-
ANNNATGATACCCCATC

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTCATACCCGAA-
ANANGTGATACCCCATT

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCATACCCGAA-
-----ACCGGAAG