Information for 13-CTTTGATART (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.908
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets163.5 +/- 62.8bp
Average Position of motif in Background139.5 +/- 80.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGATART---
TCTTTANTAATANN

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGATART---
NCNTTTGTTATTTNN

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATART--
ATTTCCTTTGATCTATA

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATART--
AATCCCTTTGATCTATC

MA0523.1_TCF7L2/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGATART-
TNCCTTTGATCTTN

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATART--
NNTTCCTTTGATCTANA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGATART
CCTTTGATGT-

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATART--
NNTTCCTTTGATCTNNA

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTTTGATART
-TTTAAT---

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATART--
TNNTCCTTTGTTCTNNT