Information for 12-GACCCCTA (Motif 23)


Reverse Opposite:

p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.627
Number of Target Sequences with motif718.0
Percentage of Target Sequences with motif52.14%
Number of Background Sequences with motif20434.9
Percentage of Background Sequences with motif43.87%
Average Position of motif in Targets142.0 +/- 80.3bp
Average Position of motif in Background144.3 +/- 92.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------GACCCCTA---
NNNNTTGACCCCTNNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------GACCCCTA---
NNANTTGACCCCTNNNN

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.77
Offset:-6
Orientation:forward strand
Alignment:------GACCCCTA---
TGTCGTGACCCCTTAAT

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GACCCCTA------
NTCNTCCCCTATNNGNN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GACCCCTA-
TTCCCCCTAC

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GACCCCTA-----
AGGAGACCCCCAATTTG

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GACCCCTA----
TATCGACCCCCCACAG

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACCCCTA---
CGCCCCCTGACA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCCCTA
TGACCT---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCCTA---
NNNNTGACCTTTNNNN