Information for 14-CGTGTGTA (Motif 25)


Reverse Opposite:

p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.596
Number of Target Sequences with motif386.0
Percentage of Target Sequences with motif28.03%
Number of Background Sequences with motif9979.3
Percentage of Background Sequences with motif21.42%
Average Position of motif in Targets146.4 +/- 77.0bp
Average Position of motif in Background145.6 +/- 94.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CGTGTGTA----
GGGCCGTGTGCAAAAA

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTGTA-----
NNGCGTGTGTGCNGCN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGTGTGTA
TGCGTG--

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTGTGTA---
NYYTGTTTACHN

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGTGTGTA
GGACGTGC---

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTGTGTA--
--TGTTTACA

MA0004.1_Arnt/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTGTGTA
CACGTG----

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTGTGTA---
TNTGTTTACTT

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTGTGTA
GGTAAGTA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTGTGTA
TTGCGTGCVA-