Information for 19-ATCTCCGGAG (Motif 27)


Reverse Opposite:

p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.956
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif47.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets150.0 +/- 63.1bp
Average Position of motif in Background135.5 +/- 100.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCTCCGGAG
TTCTNMGGAA

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCTCCGGAG-
ATTCTCGCGAGA

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ATCTCCGGAG-
-----CGGAGC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCTCCGGAG
NRYTTCCGGY-

MA0154.2_EBF1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCTCCGGAG--
-TCCCTGGGGAN

MA0028.1_ELK1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTCCGGAG-
-CTTCCGGNNN

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCTCCGGAG----
GTTCTCGCGAGANCC

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCTCCGGAG----
AANNATCCGGATGTNN

MA0520.1_Stat6/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCTCCGGAG---
ANTTCTCAGGAANNN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATCTCCGGAG
NRYTTCCGGH-