Information for 23-CTGCACTGATCA (Motif 29)


Reverse Opposite:

p-value:1e-3
log p-value:-9.128e+00
Information Content per bp:1.962
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets162.9 +/- 78.8bp
Average Position of motif in Background119.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTGCACTGATCA
AATCGCACTGCATTCCG--

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGCACTGATCA------
---TAGTGATCATCATTA

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGCACTGATCA-----
NTNTTCTTATCAGTNTN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCACTGATCA
--GCAGTGATTT

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCACTGATCA------
-TNAGNTGATCAACCGGT

PH0096.1_Lhx6_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGCACTGATCA------
-TACATTAATTAACGNTN

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCACTGATCA
ATGGGGTGAT--

MA0122.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGCACTGATCA
-NCCACTTAN--

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGCACTGATCA----
NNNCACTAATTANTNN

MA0483.1_Gfi1b/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGCACTGATCA
-TGCTGTGATTT