Information for 8-TGAAACTTTCTT (Motif 4)


Reverse Opposite:

p-value:1e-15
log p-value:-3.484e+01
Information Content per bp:1.784
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif148.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets153.7 +/- 83.0bp
Average Position of motif in Background149.1 +/- 89.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAAACTTTCTT
ACTGAAACCA----

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAAACTTTCTT-
--NNACTTGCCTT

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGAAACTTTCTT-
--NNACTTACCTN

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAAACTTTCTT
TTTGAAACCG----

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAAACTTTCTT
---TACTTCCTT

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACTTTCTT
GAAACTGAAACT-----

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TGAAACTTTCTT
GGAAANTGAAACTNA---

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGAAACTTTCTT--
----ACTTCCTBGT

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TGAAACTTTCTT
CAAAATCGAAACTAA---

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGAAACTTTCTT
--AAGCTTG---