Information for 3-TTCCAACGAA (Motif 5)


Reverse Opposite:

p-value:1e-14
log p-value:-3.330e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets154.0 +/- 71.7bp
Average Position of motif in Background270.7 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TTCCAACGAA
TTCCKNAGAA

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCCAACGAA--
TTCTNNAGAANT

MA0520.1_Stat6/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TTCCAACGAA--
CATTTCCTGAGAAAT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTCCAACGAA
HTTTCCCASG--

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCCAACGAA-
AGNGTTCTAATGANN

MA0152.1_NFATC2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCCAACGAA
TTTTCCA-----

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCAACGAA
TGCCAA----

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAACGAA
TTTCCCAGAAN

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTCCAACGAA
TAGTATTTCCGATCTT

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTCCAACGAA--
ACTATGCCAACCTACC