Information for 1-TGTGTRTATGTG (Motif 1)


Reverse Opposite:

p-value:1e-67
log p-value:-1.544e+02
Information Content per bp:1.811
Number of Target Sequences with motif212.0
Percentage of Target Sequences with motif27.08%
Number of Background Sequences with motif1803.0
Percentage of Background Sequences with motif6.87%
Average Position of motif in Targets131.1 +/- 64.3bp
Average Position of motif in Background126.7 +/- 163.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)2.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTRTATGTG
NNNNTTTGTTTACNNT

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTGTRTATGTG
TATGTNTA----

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTGTRTATGTG
--TGTTTATTT-

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTRTATGTG--
NTNTATGTGCACATNNN

MA0042.1_FOXI1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTGTRTATGTG
GGATGTTTGTTT---

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTRTATGTG---
NTTNTATGAATGTGNNC

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTGTRTATGTG-----
TAAATACATGTAAAATT

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTRTATGTG
NNNNTTGTGTGCTTNN-

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTGTRTATGTG-----
AATATACATGTAATATA

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTGTRTATGTG-----
AAAATACATGTAAAAAT