Information for 21-GATGGTATGATA (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.814e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets108.1 +/- 58.1bp
Average Position of motif in Background154.3 +/- 52.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0596.1_SREBF2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATGGTATGATA
-ATGGGGTGAT-

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GATGGTATGATA
-ATGGGGTGAT-

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GATGGTATGATA--
AGATGKDGAGATAAG

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATGGTATGATA
-GTGGGGTGAT-

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATGGTATGATA-
-GTGGCGTGACNG

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGGTATGATA-
GTNTTGTTGTGANNT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GATGGTATGATA
AAAGATGATGTCATC

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGGTATGATA---
GAAAAGGTGTGAAAATT

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GATGGTATGATA
AAGATGATGTCAT-

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GATGGTATGATA
NTTGATTNNATCAN-