Information for 20-TCAGTGATAC (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets141.4 +/- 57.6bp
Average Position of motif in Background125.5 +/- 47.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
ANANNTGATACCCNATN

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
ANANGTGATACCCTATN

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
ANANGTGATACCCCATT

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
ANANNTGATACCCTATN

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
ANNNATGATACCCCATC

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TCAGTGATAC
NNNNTGCCAGTGATTG

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTGATAC------
AATNTTGATACCCTATN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCAGTGATAC--
--ACTGAAACCA

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCAGTGATAC
-NCGTGACN-

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCAGTGATAC------
ATAAATGACACCTATCA