Information for 16-CTACCTCG (Motif 20)


Reverse Opposite:

p-value:1e-5
log p-value:-1.300e+01
Information Content per bp:1.873
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif209.8
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets117.6 +/- 72.6bp
Average Position of motif in Background104.9 +/- 86.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTACCTCG
NNACTTACCTN-

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTACCTCG----
NNNNATGACCTTGANTN

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTACCTCG-
NTGACCTTGA

MA0598.1_EHF/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACCTCG
CCTTCCTG-

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTACCTCG--
TGACCTTGAV

MA0141.2_Esrrb/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTACCTCG----
TGACCTTGANNN

MA0592.1_ESRRA/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTACCTCG-
NGTGACCTTGG

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTACCTCG--
TGACCTTGAN

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTACCTCG-
-TACTNNNN

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTACCTCG-------
GAGCCCTTGTCCCTAA