Information for 23-GTATAGTGTACT (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.927
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets186.3 +/- 46.4bp
Average Position of motif in Background136.3 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTATAGTGTACT
-TATTGTTTATT

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTGTACT---
NNNNTTGTGTGCTTNN

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTATAGTGTACT------
-TTCNAAGTACTTNNNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTATAGTGTACT--
--NNTGTGGATTSS

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GTATAGTGTACT----
--------TACTNNNN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTATAGTGTACT------
--NNATTGGACTTTNGNN

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGTGTACT
NNNCCATTGTGTNAN

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTGTACT---
NNTTTATTGTTCTNNN

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTGTACT----
NNNTTTGTTTACTTTTN

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTGTACT----
NNNTTTGTTTACNTTNN