Information for 6-AGATATGT (Motif 5)


Reverse Opposite:

p-value:1e-24
log p-value:-5.535e+01
Information Content per bp:1.878
Number of Target Sequences with motif277.0
Percentage of Target Sequences with motif35.38%
Number of Background Sequences with motif5168.5
Percentage of Background Sequences with motif19.68%
Average Position of motif in Targets129.9 +/- 71.4bp
Average Position of motif in Background125.0 +/- 130.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGATATGT---
---TATGTNTA

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGATATGT-----
NNNCTGATATCTCNNNN

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGATATGT--
NNATAAGGNN

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
AATATACATGTAAAATT

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
TAAATACATGTAAAATT

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
AATATACATGTAATATA

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
AAAATACATGTAATACT

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGATATGT-----
ANNNGGATATATCCNNN

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
AATATACATGTAAAACA

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGATATGT------
AAAATACATGTAAAAAT