Information for 1-ACAGAAGCATTC (Motif 1)


Reverse Opposite:

p-value:1e-19
log p-value:-4.459e+01
Information Content per bp:1.926
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets182.7 +/- 88.3bp
Average Position of motif in Background162.6 +/- 89.0bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGAAGCATTC
ATGTACAGTAGCAAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAGAAGCATTC
ATTTACAGTAGCAAAA

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACAGAAGCATTC
--NGAAGC----

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACAGAAGCATTC----
------RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACAGAAGCATTC----
------GCATTCCAGN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACAGAAGCATTC----
------RCATTCCWGG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACAGAAGCATTC
ANCCGGAAGT----

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAAGCATTC
RCCGGAAGTD---

MA0028.1_ELK1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACAGAAGCATTC
GAGCCGGAAG-----

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACAGAAGCATTC
AAACAAACATTC