Information for 10-GATAGAGCAGTT (Motif 11)


Reverse Opposite:

p-value:1e-15
log p-value:-3.466e+01
Information Content per bp:1.900
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif51.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets157.8 +/- 100.8bp
Average Position of motif in Background175.2 +/- 109.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GATAGAGCAGTT--
----BRRCVGTTDN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GATAGAGCAGTT-
---ACAGCTGTTV

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GATAGAGCAGTT--
----TGGCAGTTGG

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATAGAGCAGTT-----
--CACGGCAGTTGGTNN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GATAGAGCAGTT-
-----GGCVGTTR

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATAGAGCAGTT-----
-NNNTGGCAGTTGGTNN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATAGAGCAGTT
----CAGCTGTT

MA0501.1_NFE2::MAF/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATAGAGCAGTT-
ATGACTCAGCAATTT

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATAGAGCAGTT-----
-GAAGAACAGGTGTCCG

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATAGAGCAGTT------
-NNNNAGCAGCTGCTGAN