Information for 13-TGCATGCACACA (Motif 14)


Reverse Opposite:

p-value:1e-12
log p-value:-2.899e+01
Information Content per bp:1.716
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif14.39%
Number of Background Sequences with motif1695.9
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets186.5 +/- 85.7bp
Average Position of motif in Background184.8 +/- 162.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.70
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCATGCACACA-----
-AGCGGCACACACGCAA

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCACACA--
NTNTATGTGCACATNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCATGCACACA----
NNTTTGCACACGGCCC

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCATGCACACA-----
-CGAAGCACACAAAATA

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCACACA
GCGCATGCGCAC-

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCATGCACACA
TCCAATCCACA--

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCACACA--
NNGTATGTGCACATNNN

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCATGCACACA
CCATTGTATGCAAAT-

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGCACACA
GCGCATGCGCAG-

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCATGCACACA
SSAATCCACANN