Information for 17-GTGGAAAAGGAA (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.928
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif33.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets163.5 +/- 103.7bp
Average Position of motif in Background151.5 +/- 99.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGGAAAAGGAA
-TGGAAAA----

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTGGAAAAGGAA-----
--GGAAANTGAAACTNA

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTGGAAAAGGAA
-----AGAGGAA

MA0136.1_ELF5/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTGGAAAAGGAA---
------AAGGAAGTA

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTGGAAAAGGAA--
----AVCAGGAAGT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAAAAGGAA
AATGGAAAAT---

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTGGAAAAGGAA--
----AACAGGAAGT

MA0474.1_Erg/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GTGGAAAAGGAA----
-----ACAGGAAGTGG

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTGGAAAAGGAA----
-AAAAAGAGGAAGTGA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTGGAAAAGGAA---
---GAAAGTGAAAGT