Information for 7-GATGATTGCA (Motif 19)


Reverse Opposite:

p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.832
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif12.59%
Number of Background Sequences with motif1581.3
Percentage of Background Sequences with motif3.43%
Average Position of motif in Targets183.1 +/- 106.1bp
Average Position of motif in Background182.0 +/- 119.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GATGATTGCA----
TNNNATGATTTCNNCNN

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GATGATTGCA---
-GGGATTGCATNN

MA0466.1_CEBPB/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GATGATTGCA----
---TATTGCACAAT

MA0102.3_CEBPA/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GATGATTGCA-----
----ATTGCACAATA

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATGATTGCA----
ACTATGAATGAATGAT

MA0488.1_JUN/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATGATTGCA-
AAGATGATGTCAT

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATGATTGCA-
NGATGACGTCAT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATGATTGCA--
AAAGATGATGTCATC

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GATGATTGCA---
NNNNGTTGATTGGGTCG

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GATGATTGCA---
----ATTGCATAA