Information for 18-CTCTCTGAGGAT (Motif 21)


Reverse Opposite:

p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.786
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif127.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets211.0 +/- 69.7bp
Average Position of motif in Background177.2 +/- 111.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTGAGGAT
NGTCCCNNGGGA-

MA0154.2_EBF1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGAGGAT
-TCCCTGGGGAN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTCTGAGGAT
--TTCTNMGGAA

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGAGGAT-
-TTTCTNAGAAAN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTGAGGAT
GTCCCCAGGGGA-

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTGAGGAT
ACCACTCTCGGTCAC-

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTGAGGAT
NNAATTCTCGNTNAN-

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTCTCTGAGGAT---
---NNTGTGGATTSS

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTGAGGAT---
TCTTTCGAGGAATTTG

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTGAGGAT
AGTATTCTCGGTTGC-