Information for 2-CAACTGGA (Motif 23)


Reverse Opposite:

p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.874
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif10.43%
Number of Background Sequences with motif1419.3
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets169.9 +/- 109.1bp
Average Position of motif in Background184.3 +/- 111.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAACTGGA---
CGACCAACTGCCGTG

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CAACTGGA---
AANTTCAAGTGGCTTN

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CAACTGGA---
NANTTTCAAGTGGTTAN

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAACTGGA---
AAATTCAAGTGGNTTN

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAACTGGA----
CGACCAACTGCCATGC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAACTGGA--
GGTCTGGCAT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACTGGA-
CCAACTGCCA

MA0122.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAACTGGA
TTAAGTGGA

MA0100.2_Myb/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAACTGGA-
CCAACTGCCA

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CAACTGGA---
AATTTCAAGTGGCTTN