Information for 3-CTACACGG (Motif 25)


Reverse Opposite:

p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.923
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif149.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets214.6 +/- 93.4bp
Average Position of motif in Background182.4 +/- 121.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTACACGG-
-TACTNNNN

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTACACGG
ATCCAC--

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACACGG
--ACAAAG

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACACGG--
--GCACGTNC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTACACGG-
---CACGCA

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTACACGG-
---CACAGN

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTACACGG--
--GCACGTAY

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTACACGG----------
TGTCATTACACGTGGAAGGCGGT

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTACACGG-
NNGCNCTGCGCGGC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CTACACGG--
AATCGCACTGCATTCCG