Information for 19-TGRACACTWTTA (Motif 26)


Reverse Opposite:

p-value:1e-7
log p-value:-1.651e+01
Information Content per bp:1.849
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets169.2 +/- 45.0bp
Average Position of motif in Background67.9 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGRACACTWTTA
CCAGGAACAG-----

MA0027.1_En1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGRACACTWTTA
-GANCACTACTT

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGRACACTWTTA-
NNNNTGAGCACTGTNNG

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGRACACTWTTA-
TTAAGAACAATAAATT

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGRACACTWTTA---
-AAAAACCATTAAGG

MA0074.1_RXRA::VDR/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGRACACTWTTA---
TGAACCCGATGACCC

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGRACACTWTTA-
TTTAGAACAATAAAAT

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGRACACTWTTA-
CATAAGACCACCATTAC

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGRACACTWTTA-
CGAAGCACACAAAATA

MA0007.2_AR/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGRACACTWTTA--
AAGAACAGAATGTTC