Information for 19-TCCTATAGAT (Motif 27)


Reverse Opposite:

p-value:1e-6
log p-value:-1.540e+01
Information Content per bp:1.957
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif66.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets148.0 +/- 110.3bp
Average Position of motif in Background186.5 +/- 100.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCTATAGAT--
--NTATYGATCH

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TCCTATAGAT
GATAACATCCTAGTAG-

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCTATAGAT-------
--GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCTATAGAT-------
--GTATAAAAGGCGGGG

MA0463.1_Bcl6/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCTATAGAT--
TTTCCTAGAAAGCA

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCTATAGAT------
ATGGGATATATCCGCCT

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCCTATAGAT
TACTTCCTT-----

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCCTATAGAT----
------AGATAASR

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCTATAGAT-----
TCTTTATATATAAATA

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCTATAGAT
TTCCTCT----