Information for 6-TCTATCTA (Motif 28)


Reverse Opposite:

p-value:1e-5
log p-value:-1.249e+01
Information Content per bp:1.864
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif16.55%
Number of Background Sequences with motif3764.3
Percentage of Background Sequences with motif8.16%
Average Position of motif in Targets184.5 +/- 95.5bp
Average Position of motif in Background181.0 +/- 142.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTATCTA--
--TATGTNTA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTATCTA
YSTTATCT-

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTATCTA
TCTTATCT-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTATCTA----
KCTATTTTTRGH

MA0070.1_PBX1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTATCTA-
CCATCAATCAAA

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTATCTA----
TGTATATATATACC

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTATCTA---
-CTATTTTTGG

MA0052.2_MEF2A/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTATCTA-----
NNGCTATTTTTAGCN

MA0035.3_Gata1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTATCTA-
TTCTTATCTGT

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTATCTA-------
ATGGGATATATCCGCCT