Information for 21-ATCTAATCTRTC (Motif 30)


Reverse Opposite:

p-value:1e-5
log p-value:-1.178e+01
Information Content per bp:1.640
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif18.35%
Number of Background Sequences with motif4483.7
Percentage of Background Sequences with motif9.72%
Average Position of motif in Targets179.1 +/- 93.6bp
Average Position of motif in Background178.9 +/- 118.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATCTAATCTRTC---
NDBAGATRWTATCTVNNNNN

MA0468.1_DUX4/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCTAATCTRTC
TAATTTAATCA---

MA0029.1_Mecom/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATCTAATCTRTC
TNTTATCTTATCTT--

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATCTAATCTRTC----
NNTNANTTCTTATCTCTANANN

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCTAATCTRTC
ATGATCGAATCAAA-

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCTAATCTRTC--
NNANTCTTATCTNNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATCTAATCTRTC---
NNNNNCGATANNATCTNNNNAN

MA0037.2_GATA3/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCTAATCTRTC
-TCTTATCT---

MA0036.2_GATA2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCTAATCTRTC
AGATTCTTATCTGT-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCTAATCTRTC
-YCTTATCWVN-