Information for 23-CGTACACATA (Motif 31)


Reverse Opposite:

p-value:1e-4
log p-value:-9.400e+00
Information Content per bp:1.663
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif47.84%
Number of Background Sequences with motif16893.7
Percentage of Background Sequences with motif36.61%
Average Position of motif in Targets187.1 +/- 98.0bp
Average Position of motif in Background181.5 +/- 142.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CGTACACATA
--TATACATA

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CGTACACATA---
TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGTACACATA---
CAGATGTGCACATACGT

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGTACACATA----
AAAGTAAACAAAAATT

MA0031.1_FOXD1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGTACACATA
-GTAAACAT-

MA0030.1_FOXF2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGTACACATA
CAAACGTAAACAAT

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTACACATA---
AAAAAGTAAACAAAGAC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTACACATA-
NDGTAAACARRN

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTACACATA
TGTAAACA--

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTACACATA---
AAAAAGTAAACAAACAC