Information for 4-GGATATTTGGAC (Motif 4)


Reverse Opposite:

p-value:1e-18
log p-value:-4.286e+01
Information Content per bp:1.907
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets166.9 +/- 92.1bp
Average Position of motif in Background182.6 +/- 98.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGATATTTGGAC
AAGGATATNTN---

MA0042.1_FOXI1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGATATTTGGAC
GGATGTTTGTTT

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGATATTTGGAC-
ANNNGGATATATCCNNN

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGATATTTGGAC
CCATATATGG--

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGATATTTGGAC
AAGGAAGTA-----

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGATATTTGGAC--
RGSMTBCTGGGAAAT

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGATATTTGGAC-
CTAATATTGCTAAA

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGATATTTGGAC---
ANCGCTAATTGGTCTNN

MA0017.1_NR2F1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGATATTTGGAC--
TGACCTTTGAACCT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGATATTTGGAC-------
---NNATTGGACTTTNGNN