Information for 6-GAAACTTCTTTG (Motif 6)


Reverse Opposite:

p-value:1e-15
log p-value:-3.638e+01
Information Content per bp:1.866
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif60.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets197.8 +/- 92.1bp
Average Position of motif in Background183.7 +/- 89.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAACTTCTTTG
ACTGAAACCA-----

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAAACTTCTTTG-------
---ANTCCTTTGTCTNNNN

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAAACTTCTTTG
TTCTAGAABNTTCTA--

MA0486.1_HSF1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAAACTTCTTTG
CTTCTAGAAGGTTCT---

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GAAACTTCTTTG---
TTCTAGAANNTTCCAGAANN

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAAACTTCTTTG
CGTATCGAAACCAAA---

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTTCTTTG
ATAAACCGAAACCAA----

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAAACTTCTTTG-
---ACTTCCTBGT

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAAACTTCTTTG-------
--TNNTCCTTTGTTCTNNT

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GAAACTTCTTTG
CTGATCGAAACCAAAGT-