Information for 2-TCAACTCACA (Motif 8)


Reverse Opposite:

p-value:1e-15
log p-value:-3.587e+01
Information Content per bp:1.974
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif46.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets202.5 +/- 107.8bp
Average Position of motif in Background180.1 +/- 112.4bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCAACTCACA
CCAACTGCCA

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCAACTCACA
ATCACCCCAC-

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCAACTCACA
ATCACCCCAT-

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAACTCACA
TCCAATCCACA

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCAACTCACA---
CGACCAACTGCCATGC

MA0038.1_Gfi1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAACTCACA-
-CAAATCACTG

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCAACTCACA
CCAACTGCCA

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAACTCACA
GKVTCADRTTWC-

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCAACTCACA
CNGTCACGCCAC-

MA0133.1_BRCA1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAACTCACA
ACAACAC---