Information for 8-CTTTTWGCAGAA (Motif 9)


Reverse Opposite:

p-value:1e-15
log p-value:-3.499e+01
Information Content per bp:1.846
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif67.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets183.5 +/- 121.7bp
Average Position of motif in Background179.9 +/- 109.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0144.2_STAT3/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTTTWGCAGAA-
--TTTCCCAGAAN

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTWGCAGAA-
ANATTTTTGCAANTN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTTWGCAGAA
-ATTTCCAAGAA

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTTTWGCAGAA-
--TTTCCTGGAAA

MA0518.1_Stat4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTWGCAGAA-
NNNTTTCCTGGAAA

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTTWGCAGAA-
-NTTTCTNAGAAA

MA0152.1_NFATC2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTTTTWGCAGAA
--TTTTCCA---

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTTTWGCAGAA
--TTCCKNAGAA

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTTTWGCAGAA--
--TTCTNNAGAANT

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTTTTWGCAGAA--
NATTTCCNGGAAAT