Information for 7-CCCTRRGCCY (Motif 10)


Reverse Opposite:

p-value:1e-77
log p-value:-1.779e+02
Information Content per bp:1.555
Number of Target Sequences with motif8840.0
Percentage of Target Sequences with motif33.77%
Number of Background Sequences with motif7359.8
Percentage of Background Sequences with motif28.48%
Average Position of motif in Targets153.7 +/- 83.1bp
Average Position of motif in Background153.0 +/- 91.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTRRGCCY---
TGCCCTGGGGCNANN

MA0003.2_TFAP2A/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCTRRGCCY---
TGCCCTGAGGCANTN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCTRRGCCY
ATGCCCTGAGGC-

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCTRRGCCY-
GGGGCCGAGGCCTG

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTRRGCCY
WTGSCCTSAGGS-

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCTRRGCCY-
NTGCCCTAGGGCAA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTRRGCCY
TCCCCTGGGGAC

MA0163.1_PLAG1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCTRRGCCY--
CCCCCTTGGGCCCC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTRRGCCY
--CTAGGCCT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCTRRGCCY-
TCACCTCTGGGCAG