Information for 11-CTGGCAAATCGG (Motif 19)


Reverse Opposite:

p-value:1e-42
log p-value:-9.875e+01
Information Content per bp:1.837
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets156.6 +/- 83.0bp
Average Position of motif in Background130.9 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAAATCGG
AATGGAAAAT---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAAATCGG
CSTGGGAAAD---

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGCAAATCGG
-TGGAAAA----

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAAATCGG
CTTGGCAA-----

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGGCAAATCGG
--AGCCAATCGG

MA0144.2_STAT3/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGGCAAATCGG
CTTCTGGGAAA----

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGGCAAATCGG
GGTCTGGCAT-----

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTGGCAAATCGG
CAATCACTGGCAGAAT--

MA0161.1_NFIC/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGCAAATCGG
TTGGCA------

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCAAATCGG
TTCTTGGAAAN---