Information for 2-TWACGGYT (Motif 2)


Reverse Opposite:

p-value:1e-111
log p-value:-2.568e+02
Information Content per bp:1.594
Number of Target Sequences with motif7747.0
Percentage of Target Sequences with motif29.59%
Number of Background Sequences with motif6083.3
Percentage of Background Sequences with motif23.54%
Average Position of motif in Targets151.6 +/- 88.1bp
Average Position of motif in Background151.9 +/- 94.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0046.1_Mybl1_1/Jaspar

Match Rank:1
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----TWACGGYT-----
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TWACGGYT-----
NNNNTAACGGTTNNNAN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TWACGGYT-
NHAACBGYYV

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TWACGGYT
YAACBGCC

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TWACGGYT
TGTCGGTT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TWACGGYT-
CCAACTGCCA

PB0020.1_Gabpa_1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TWACGGYT---
NNNNACTTCCGGTATNN

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TWACGGYT
ACTTCCGGTT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TWACGGYT
ACTTCCGGNT

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TWACGGYT
ACTTCCGGTN