Information for 12-TTTCGCGGCC (Motif 23)


Reverse Opposite:

p-value:1e-38
log p-value:-8.870e+01
Information Content per bp:1.646
Number of Target Sequences with motif4835.0
Percentage of Target Sequences with motif18.47%
Number of Background Sequences with motif4000.7
Percentage of Background Sequences with motif15.48%
Average Position of motif in Targets152.6 +/- 85.1bp
Average Position of motif in Background153.8 +/- 96.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCGGCC-
TTTTCGCGCGAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTCGCGGCC
VDTTTCCCGCCA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCGGCC
DTTTCCCGCC-

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCGGCC
NNTTCCCGCCC

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTCGCGGCC-
CCTCCCGCCCN

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCGCGGCC
NNGCNCTGCGCGGC-

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTTCGCGGCC-
---CTAGGCCT

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTCGCGGCC-
-TTCCCGCCWG

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGCGGCC
NCTTCCCGCCC

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTTCGCGGCC--
AGTATTCTCGGTTGC