Information for 20-TATTGGGAGATC (Motif 28)


Reverse Opposite:

p-value:1e-30
log p-value:-7.007e+01
Information Content per bp:1.629
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets144.8 +/- 91.1bp
Average Position of motif in Background175.8 +/- 101.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TATTGGGAGATC-
TTATTAGTACATAN

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TATTGGGAGATC--
HWWNNTAATTRGCHAATTAN

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TATTGGGAGATC
-ATTGCGCAAC-

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATTGGGAGATC
TATTGCACAAT-

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TATTGGGAGATC
CAGGTAATTACCTCAG-

MA0102.3_CEBPA/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATTGGGAGATC
NATTGTGCAAT-

MA0087.1_Sox5/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATTGGGAGATC
-ATTGTTA----

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATTGGGAGATC
CTCATTGTC-----

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TATTGGGAGATC
NNNCCATTGTGTNAN-

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TATTGGGAGATC
CTAATATTGCTAAA--