Information for 1-RSTTTCABTTTC (Motif 3)


Reverse Opposite:

p-value:1e-106
log p-value:-2.454e+02
Information Content per bp:1.692
Number of Target Sequences with motif436.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif121.5
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets142.6 +/- 95.3bp
Average Position of motif in Background146.3 +/- 89.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:RSTTTCABTTTC
ACTTTCACTTTC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:RSTTTCABTTTC
RSTTTCRSTTTC

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:RSTTTCABTTTC
AGTTTCAGTTTC

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--RSTTTCABTTTC-
TCAGTTTCATTTTCC

MA0050.2_IRF1/Jaspar

Match Rank:5
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----RSTTTCABTTTC-----
TTTTACTTTCACTTTCACTTT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:RSTTTCABTTTC-
-GTTTCACTTCCG

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--RSTTTCABTTTC-
TCACTTTCACTTTCN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.84
Offset:0
Orientation:forward strand
Alignment:RSTTTCABTTTC
ACTTTCACTTTC

MA0051.1_IRF2/Jaspar

Match Rank:9
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----RSTTTCABTTTC-
GTTTTGCTTTCACTTTCC

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-RSTTTCABTTTC-
CAGTTTCGNTTCTN