Information for 14-CGGGTTCATC (Motif 30)


Reverse Opposite:

p-value:1e-28
log p-value:-6.656e+01
Information Content per bp:1.974
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets164.1 +/- 82.7bp
Average Position of motif in Background51.5 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGGGTTCATC---
NTNNNGGGGTCANGNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTCATC---
CTCCAGGGGTCAATTGA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTCATC--
CGCGCCGGGTCACGTA

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTCATC--
AGAGCGGGGTCAAGTA

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGGTTCATC------
ACCGGTTGATCACCTGA

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTCATC---
GGCGAGGGGTCAAGGGC

MA0074.1_RXRA::VDR/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGGGTTCATC
GGGTCAACGAGTTCA--

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CGGGTTCATC
NNNNATGCGGGTNNNN-

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGGGTTCATC--
GGGCCGTGTGCAAAAA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGGGTTCATC
----GTCATN