Information for 21-GTTTTAAC (Motif 31)


Reverse Opposite:

p-value:1e-28
log p-value:-6.589e+01
Information Content per bp:1.624
Number of Target Sequences with motif5334.0
Percentage of Target Sequences with motif20.38%
Number of Background Sequences with motif4571.8
Percentage of Background Sequences with motif17.69%
Average Position of motif in Targets155.6 +/- 88.6bp
Average Position of motif in Background153.3 +/- 92.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GTTTTAAC-----
NNNNCTGTTAACNNTNN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTAAC----
AGNGTTCTAATGANN

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTTTTAAC
CGGTTTCAAA

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTTTAAC----
--TTTAATTGCN

MA0151.1_ARID3A/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTTTTAAC
--TTTAAT

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTTTTAAC---
-TTTTATTRGN

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTTTTAAC------
ACTTAGTTAACTAAAAA

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTTTAAC------
CCTTAGTTAACTAAAAT

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTTTAAC-------
AGCTGTTAACTAGCCGT

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTAAC-----
NNANTTTTATTGGNNN