Information for 21-GCACTGATCA (Motif 32)


Reverse Opposite:

p-value:1e-18
log p-value:-4.231e+01
Information Content per bp:1.987
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets151.9 +/- 87.7bp
Average Position of motif in Background104.4 +/- 80.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTGATCA
NNNNTGAGCACTGTNNG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCACTGATCA
GCAGTGATTT

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACTGATCA------
-TAGTGATCATCATTA

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCACTGATCA------
TAAACTGATAAGAAGAT

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACTGATCA
AAGCACTTAA--

MA0122.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGATCA
NCCACTTAN--

PH0016.1_Cux1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACTGATCA-----
ACCGGTTGATCACCTGA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCACTGATCA
NTATYGATCH

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCACTGATCA-------
TCACCCATCAATAAACA

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCACTGATCA
TCATCAATCA