Information for 24-TGCTATTT (Motif 34)


Reverse Opposite:

p-value:1e-16
log p-value:-3.907e+01
Information Content per bp:1.951
Number of Target Sequences with motif998.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif747.4
Percentage of Background Sequences with motif2.89%
Average Position of motif in Targets159.5 +/- 95.5bp
Average Position of motif in Background151.5 +/- 85.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TGCTATTT-----
-KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGCTATTT-------
TTCTATTTTTAGNNN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TGCTATTT----
--CTATTTTTGG

MA0052.2_MEF2A/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTT------
NNGCTATTTTTAGCN

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATTT--
NCNTTTGTTATTTNN

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATTT----
CCTTGCAATTTTTNN

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCTATTT-----
ACTTGCTACCTACACC

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTATTT---
---TATGTNTA

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCTATTT---
NTNTTGTTGTTTGTN

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCTATTT-----
ACATGCTACCTAATAC