Information for 24-CGCGTAGTCCGC (Motif 35)


Reverse Opposite:

p-value:1e-15
log p-value:-3.456e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets153.3 +/- 81.9bp
Average Position of motif in Background79.1 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCGTAGTCCGC
GCCGCGCAGTGCGT

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCGTAGTCCGC---
TCGCGAAGGTTGTACT

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCGTAGTCCGC----
AGGCTAATCCCCAANG

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCGTAGTCCGC-
-GCTGASTCAGCA

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGCGTAGTCCGC
GCACGTACCC---

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTAGTCCGC----
NNNATTAATCCGNTTNA

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGTAGTCCGC
CGTGGGTGGTCC--

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCGTAGTCCGC------
-NCTANGTCAGCAAATTT

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CGCGTAGTCCGC-------
-GCTGAGTCAGCAATTTTT

MA0117.1_Mafb/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CGCGTAGTCCGC
----NCGTCAGC