Information for 3-TAGGCCCT (Motif 4)


Reverse Opposite:

p-value:1e-106
log p-value:-2.452e+02
Information Content per bp:1.596
Number of Target Sequences with motif13660.0
Percentage of Target Sequences with motif52.18%
Number of Background Sequences with motif11735.0
Percentage of Background Sequences with motif45.41%
Average Position of motif in Targets152.9 +/- 85.8bp
Average Position of motif in Background152.0 +/- 91.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCCCT
CTAGGCCT-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCCCT
CNAGGCCT-

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TAGGCCCT----
AAGCATACGCCCAACTT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAGGCCCT------
CAGGCCNNGGCCNN

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TAGGCCCT---
TTNGGGTACGCCNNANN

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TAGGCCCT-----
GGGTGTGCCCAAAAGG

MA0597.1_THAP1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAGGCCCT--
-CTGCCCGCA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TAGGCCCT
TAATCCCN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAGGCCCT-----
-ATGCCCTGAGGC

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAGGCCCT------
NNGCACCTTTCTCC