Information for 5-CCTCAGAG (Motif 7)


Reverse Opposite:

p-value:1e-99
log p-value:-2.296e+02
Information Content per bp:1.518
Number of Target Sequences with motif16788.0
Percentage of Target Sequences with motif64.13%
Number of Background Sequences with motif14911.5
Percentage of Background Sequences with motif57.70%
Average Position of motif in Targets153.5 +/- 85.4bp
Average Position of motif in Background151.1 +/- 90.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGAG--
GTCCCCAGGGGA

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGAG---
GCCTCAGGGCAT

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCTCAGAG--
CATGGCCCCAGGGCA

MA0003.2_TFAP2A/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCTCAGAG--
CATTGCCTCAGGGCA

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTCAGAG
AAACCACAGAN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTCAGAG---
SCCTSAGGSCAW

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTCAGAG-
GTCCCCAGGGA

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTCAGAG
-CACAGN-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTCAGAG
NWAACCACADNN

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCTCAGAG---
NTCGCCTCAGGCAAT