Information for 1-CTACTGTACAAT (Motif 1)


Reverse Opposite:

p-value:1e-12
log p-value:-2.880e+01
Information Content per bp:1.768
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif399.5
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets965.3 +/- 422.8bp
Average Position of motif in Background986.2 +/- 603.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTGTACAAT
CNNNGCTACTGTANNN-

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTACTGTACAAT
TNNTGCTACTGTNNNN-

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTACTGTACAAT------
-TAGTGAACAATAGATTT

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTACTGTACAAT-----
TCACGGAACAATAGGTG

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACTGTACAAT------
-TNNAGAACAATANATNN

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTACTGTACAAT-----
NNNNNGAACAATTGANN

MA0102.3_CEBPA/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTACTGTACAAT
-NATTGTGCAAT

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTACTGTACAAT
--GTTGCGCAAT

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTACTGTACAAT-------
--NNTNNACAATGGGANNN

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTACTGTACAAT------
-TNCNNAACAATTTTTNC